There was no systematic schedule for INR monitoring after the adm

There was no systematic schedule for INR monitoring after the administration of reversal agents, and repeat doses of coagulation factors were administered at the treating provider’s discretion based on the follow-up INR after the first dose. There was no systematic screening for TGF-beta Smad signaling thromboembolic events; patients were assessed for any potential thromboembolic complications as was deemed clinically appropriate. Data were

compared between the two groups to determine if differences were statistically significant for the above-mentioned demographic, coagulation, and outcome parameters, with the primary efficacy end-point being achievement of goal INR less than or equal to 1.5, and the primary safety end-point being number of thromboembolic events. Statistical tests utilized include the Wilcoxon Rank Sum test to compare continuous data, reported as median [IQR], and

Chi Square Captisol or Fisher exact test for categorical data, reported as n, %. A p value less than or equal to 0.05 was considered statistically significant. Results Based on inclusion and exclusion criteria, 74 PCC3 patients and 32 LDrFVIIa patients were included in the final analysis (Figure 1). There were no significant differences between the groups with regards to age, gender, or indication for anticoagulation with warfarin (Table 1). There Trk receptor inhibitor & ALK inhibitor was also no difference in the indication for emergent reversal (Table 2), except for more patients who presented with subdural hematoma received LDrFVIIa. The groups were similar with regards to the percentage of patients receiving vitamin K (77.0% PCC3 vs. 68.8% LDrFVIIa, p = 0.37) or FFP (66.2% PCC3 vs. 65.6% LDrFVIIa p = 0.95), and the number FFP units administered (2[0-4] PCC3 vs. 2[0-4] LDrFVIIa, p = 0.75) (Table 3). The initial dose of PCC3 was 1540[1429-1978] units or 19.9 [18.6-20.8] units/kg, and

the dose of LDrFVIIa was 1000[1000-1000] mcg or 11.5 [10.1-15.0] mcg/kg. Table 4 details the INR response comparing the two coagulation factors. Baseline INRs were equivalent for the two groups prior to the first dose of either PCC3 or LDrFVIIa (3.1[2.3-4.1] PCC3 vs. 2.8[2.2-3.6] LDrFVIIa, p = 0.52). After DNA ligase one dose of coagulation factor, 71.9% of patients in the LDrFVIIa group achieved goal INR of 1.5 or less compared to 33.8% in the PCC3 group (p = 0.001). The time between pre and post coagulation factor INRs was similar (3:53[2:32-7:17]) in PCC3 group and 4:30[2:21-6:25] in LDrFVIIa group, p = 0.78). The percent change in INR was higher after administration of LDrFVIIa compared to PCC3 (54.1% [47.3%-62.7%] for the LDrFVIIa group vs. 38.8% [30.7%-56.0%] for the PCC3 group, p = 0.002). Table 1 Baseline demographic characteristics of the study patients Characteristics PCC3 (n = 74) LD rFVIIa (n = 32) p Demographics       Age (years)* 73 [62.3-81.0] 67 [59.5-79.3] 0.32 M:F 43:31 22:10 0.

Similar situations might be found with other multikinase

Similar situations might be found with other multikinase selleck kinase inhibitor that are on the way towards approval for HCC therapy [34]. Therefore, the data of HHBV and the most specific annotations for each human protein can be used as a resource

for researchers interested in prioritizing drug targets (Additional file 1, Table S1). For example, the damage-specific DNA binding protein 1 (DDB1) had 14 identified interactions with HBV X protein (Additional file 1, Table S1), which is a highly conserved protein implicated in DNA repair and cell cycle regulation [35]. HBx in association with DDB1 may stimulate HBV replication and induce genetic instability in hepatocytes, thereby contributing to HCC development, and making this HBV-host protein interaction as an attractive target for new therapeutic interventions [36]. In addition,

it must be point out that not all of the papers that report HBV binding proteins from cell lines validate the binding of these host proteins to the corresponding HBV antigen by co-immunoprecipitation of extracts from clinical samples (infected liver and HCC tissue). At the same time, it raises a number of questions need PXD101 research buy further studies such as whether all the identified interactions really occur and have functional consequences. To identify new molecules involved in hepatocarcinogenesis, we can establish of high-throughput yeast two-hybrid (Y2H) screens and co-affinity purification methods for large scale analysis of protein-protein interaction[26], and integrate of chip-based SHP099 datasheet chromatin-immunoprecipitation Histamine H2 receptor (ChIP-chip) with expression-microarray profiling for the identification of candidate genes directly regulated by HBV[37]. Finally, a number of HHBV-HHCC and cellular processes have been studied, but many of the molecular events involved in the pathophysiology of HCC are still unclear. One single identified HHBV-HHCC may be involved in some new multiple, independently regulated HCC-specific pathways. Hence, the HBV-human protein interaction network might be to regard as the basis of a detailed map for tracking new cellular interactions, and guiding future investigations of the molecular mechanism

of oncogenesis of HBV-related HCC, even other diseases such as steatosis and fibrosis, leading to identify a series of new genes involved in these diseases. In mammals, lethal and disease-related proteins were found enriched among some proteins that are central to multiple pathways [38, 39], and preferential attachment to these proteins may be a general hallmark of viral proteins, as has recently been suggested in an analysis of the literature [40]. An important breakthrough of the further experimental study is the identification of novel signaling components and pathways that can be targeted to develop new therapeutics. Conclusions Among the infectious diseases affecting humans, HBV is one of the most common diseases in the world, particularly in developing countries.

Field procedures were fitted accordingly Birds Field observation

Field procedures were fitted accordingly. Birds Field observations and analyses followed the rules of the simplified territory mapping method (Sutherland 2006). At the height of the breeding season in 2006 and 2007, Torin 2 cost three morning counts were conducted in each margin. We walked the whole 500 m section once, and marked the position of the birds encountered on a map (scale 1:2,000) using standard codes. Care was taken to record simultaneous territorial behavior and any other indications of breeding: found nests, social behaviours, birds carrying food, nesting materials, etc. The total time spent censusing (20–60 min) was roughly proportional to the vegetation density. After

each season, all the records were transferred onto maps of individual species. On the basis of clusters of sightings, we designated breeding territories of individual pairs. For each plot, we calculated the total number of species in both seasons, and

the mean number of breeding pairs of all species except Cuckoo Cuculus canorus because this website of its unusual breeding system. Vascular plants Two methods were used to list the plant species on each study plot in one of the growing seasons 2004–2007. First, on each 500 m section, three transverse transects were laid out at 100, 250, and 400 m. Ten m wide, each transect encompassed the whole width of the margin, perpendicular to its axis (so the transect length was equal to the width of the margin). Here, a detailed phytosociological description of the plant communities was made, which allowed us to identify the full species composition. Second, plant species growing beyond the transects were recorded Batimastat concentration during the thrice-yearly walks along the whole section in spring (April–May), summer (July–August) and fall (September–October) to draw up lists of species for the whole growing season. The lists of species obtained by the two methods were then combined to obtain the full species richness in each plot. Bryophytes The bryological survey took place during fall 2007. Specific floristic-ecological data were collected along the whole length of each 500 m section. Spontaneously growing bryophytes were searched for on different substrates: bare soil, the bark

of snags and growing trees and shrubs, rotten wood, stones, Aspartate anthropogenic substrates (rails, bridges, concrete, items of trash). The bryophyte species list was then compiled, with additional ecological data ascribed to each species. Vegetation structure The occurrence of threatened species was analyzed jointly for all 70 margins, and separately for the three types distinguished on the basis of tall vegetation volume (V). To calculate this, we used the formula: Volume (m3) = Length (m) × Width (m) × Height (m), where Length is the sum of stretches with trees and shrubs along the whole 500 m section, whereas Width and Height are the mean measurements of the canopy outlines, measured at 5 points in each section: at 50, 150, 250, 350, and 450 m.

Nanoscale Res Lett 2011,6(1):p406 CrossRef 18 Muraviev DN: Inter

Nanoscale Res Lett 2011,6(1):p406.CrossRef 18. Muraviev DN: Inter-matrix synthesis of polymer stabilised metal nanoparticles for sensor applications. Contrib Sci 2005,3(1):19–32. 19. Donnan FG: Theory of membrane equilibria and membrane potentials in the presence of non-dialysing electrolytes: a contribution to physical-chemical physiology. J Membr Sci 1995,100(1):45–55.CrossRef 20. Muraviev D, Macanas J, Farre M, Munoz M, Alegret S: Novel routes for inter-matrix synthesis and characterization

of polymer stabilized metal nanoparticles for molecular recognition devices. Sensor Actuator B Chem 2006,118(1):408–417.CrossRef Competing interests The authors declare that they have no competing interests. LY2606368 Authors’ contributions JB carried out the experimental design and procedure, and material characterization and drafted the manuscript. PR and MM participated with the writing and correction of the manuscript. DNM conceived the study and participated in its design and coordination. All authors read and approved the final manuscript.”
“Background Metallic atomic-sized contacts can be created by scanning tunneling microscopy (STM) [1, 2]

or by mechanically controlled break junctions [1, 3]. In such nanocontacts, the electrical conductance is closely related to their minimum cross section. Therefore, by recording the conductance while the electrodes are displaced with respect to each other (traces of conductance), one can infer the atomic structure https://www.selleckchem.com/products/i-bet151-gsk1210151a.html of these contacts. However, to understand the structures formed at the contact, it is necessary to make use of theoretical models. Landman et al. [4] pioneered the use of molecular dynamics (MD) simulations to follow the variation of the minimum cross section during the process of stretching a nanocontact. Later, Untiedt et al. [5], by experimentally studying the jump-to-contact (JC) phenomena in gold and combining MD and electronic transport

calculations, were able to identify the formation of three basic structures before contact between the two electrodes, although a limited analysis on the conductance values was presented there. Trouwborst et al. [6] have also studied the phenomena of JC and JOC using indentation loops where the maximum conductance was limited to C59 clinical trial 1G 0, where (quantum of conductance). These experiments showed that the elasticity of the two electrodes is one of the relevant parameters to https://www.selleckchem.com/products/Vorinostat-saha.html explain these phenomena. Despite these, presently, there is not a unique picture that correlates the experiments with the MD and transport calculations regarding the different atomic structures that can be found at the contact. On the other hand, experiments, together with molecular dynamics and electronic transport calculations based on density functional theory, show how very stable structures can be obtained by repeated indentation. This has been described as a mechanical annealing phenomenon [7].

Such a study would also allow a comparison of the bone indices st

Such a study would also allow a comparison of the bone indices studied in this paper; we conjecture that PBI will be optimal. Conclusion This paper has presented an automated method for performing classical radiogrammetry for assessment of bone mass in children. This is the first PXD101 molecular weight time that a dedicated paediatric algorithm, which can analyse all images over a wide age range and which adjusts the size of the ROI to the size of the hand, has been implemented. It is also the first time the precision of radiogrammetry in children has

been reported. We set up a framework of bone indices encompassing the three classical radiogrammetric bone indices (Fig. 2), and this led us to stipulate that the new Paediatric Bone Index is the preferred index for a paediatric population. However, it is stressed that this is still hypothetical, and the MCI, for instance, could still be a better predictor of fracture risk. The main limitations of the radiogrammetric methods are that they measure only cortical bone, they are insensitive to abnormal mineralisation, and they measure on a small part of the skeleton which might not be representative of the whole skeleton. A reference data base for modern Caucasian children was presented which allows for the SHP099 clinical trial determination of PBI SDS in clinical practice. PBI can be used to analyse retrospective studies, and this could lead to a rapid increase in our knowledge of the relationship

between bone mass in childhood and future fracture risk. Acknowledgement We would like to thank APO866 order Sven Helm for providing access to the Sjælland study and Novo Nordisk for making the VIDAR film scanner available.

Conflicts of interest H. H. Thodberg is the owner of Visiana, which Regorafenib order develops, owns and markets the BoneXpert technology for automated determination of bone age, which also includes the Paediatric Bone Index method described in this paper. For all other authors, none. References 1. Tanner JM, Healy MJR, Goldstein H, Cameron N (2001) Assessment of skeletal maturity and prediction of adult height (TW3 Method). WB Saunders, London 2. Binkovitz LA, Henwood MJ (2007) Pediatric DXA: technique and interpretation. Pediatric Radiology 37:21–31CrossRefPubMed 3. Moyer-Mileur LJ, Quick JL, Murray MA (2008) Peripheral quantitative computed tomography of the tibia: pediatric reference values. Journal of Clinical Densitometry 11:283–294CrossRefPubMed 4. Thodberg HH, Kreiborg S, Juul A, Pedersen KD (2009) The BoneXpert method for automated determination of skeletal maturity. IEEE Trans Med Imaging 28:52–66CrossRefPubMed 5. Martin DD, Deusch D, Schweizer R, Binder G, Thodberg HH, Ranke MB (2009) Clinical application of automated Greulich-Pyle bone age in children with short stature. Pediatr Radiol 39:598–607CrossRefPubMed 6. van Rijn RR, Lequin MH, Thodberg HH (2009) Automatic determination of Greulich and Pyle bone age in healthy Dutch children. Pediatric Radiology 39:591–97CrossRefPubMed 7.

004, log-rank test) and higher cancer-related deaths (p = 0 002)

004, log-rank test) and higher cancer-related deaths (p = 0.002) compared to those with low eIF4E overexpression. Furthermore, eIF4E protein expression correlated with increased VEGF levels and microvessel density [18]. Significantly, eIF4E expression was independent GDC-0449 solubility dmso of ER, PR, HER-2/neu, or node status as determined by Cox proportional hazard model [18, 19]. Fresh-frozen vs formalin-fixed paraffin embedded tissue As mentioned above, high eIF4E overexpression has been associated with a worse clinical outcome [17]. However, one of the limiting factors in that study was that it required western blot analysis of fresh-frozen tissue. Fresh-frozen

tissue is typically scarce, especially in smaller tumors. Furthermore, in order to conduct a multi-institutional study to analyze enough samples for meaningful results, archived specimens will be essential. In addition, the use of paraffin-embedded archived samples would be useful for long-term follow-up. This will enable researchers and clinicians to establish eIF4E as a standard prognostic or diagnostic factor. Additionally, if eIF4E is determined to be a diagnostic factor, it may be used to personalize CX-5461 price therapeutic care of the patient. Tissue Microarrays Yang and colleagues selleck chemicals llc recently reported that eIF4E levels were moderately correlated with VEGF and cyclin

D1 in a breast cancer TMA [20]. This TMA was obtained from TARP http://​www.​cancer.​gov/​tarp/​. However, although cAMP complete histologic data was available for breast, only limited and incomplete clinical information was available. The goal of our present study was to validate our own in-house TMA’s by comparing eIF4E expression with known downstream effector molecules, cyclin D1, c-Myc, VEGF, TLK1B, and ODC. We possess complete clinical information on each specimen, which will allow future TMAs to be constructed for further

analysis. Materials and methods Tissue procurement for western blot analysis Breast cancer specimens of at least 100 mg were obtained from the tumor core at the time of surgery from each patient per IRB approved protocol. The specimens were verified by the study pathologist to be invasive mammary carcinomas. The specimens were then immediately frozen in liquid nitrogen and stored at minus 70°C for subsequent assay preparations. Construction of TMAs The archived H&E slides used for diagnosis were reviewed by the pathologist on the team for confirmation of diagnosis and selection of appropriate paraffin-embedded tissue blocks for the construction of TMAs. Slides with appropriate tissue of interest were selected and mapped to define representative areas for construction of the TMA blocks using a 1.5 mm punch size. In all, 3 TMA blocks were constructed. TMA block 1 consisted of the following specimens: 5 node positive breast ductal carcinoma, 3 node negative breast ductal carcinoma, 1 ductal carcinoma in-situ, and 1 benign breast tissue.

Dr Elmhirst’s work on the manuscript was funded by the study spon

Dr Elmhirst’s work on the manuscript was funded by the study sponsor. Steve Boonen is senior clinical investigator of the

Fund for Scientific Research and is holder of the Leuven University Chair in Metabolic Bone Diseases. The authors thank the women who participated in this study; the doctors, study nurses, and support staff at the local sites; and the monitors and study managers in the participating countries. Funding was provided by Lilly Research Center, Europe Conflicts of interest AB received funding from Eli Lilly to perform assays of bone turnover for this study. see more He has no other conflicts of interest and has received no personal funding from any pharmaceutical or diagnostic company. KB has served as consultant, received research grants from and has served on speakers’ bureau for Eli Lilly. SB has received research funding and consulting fees from Eli Lilly. RE has selleck compound previously consulted

and received lecture fees from Eli Lilly and received grant support from 1998 to 2005. FM, TN, CB, SL-L are employees of Eli Lilly. GS, JG have nothing to declare. Open Access This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and check details source are credited. Appendix: EUROFORS principal investigators Austria: B. Obermayer-Pietsch, Lkh-Universitätsklinikum Graz; L. Erlacher, Krankenhaus der Elisabethinen, Klagenfurt; G. Finkenstedt, Landeskrankenhaus-Universitätskliniken, Innsbruck; Belgium: P. Geusens, Limburgs Universitair Centrum, Diepenbeek; F. Raeman, Jan Palfijn Ziekenhuis,

Merksem; F. van den Bosch, Elisabethziekenhuis, Damme; Y. Boutson, Cliniques Universitaires L-NAME HCl de Mont Godinne, Yvoir; J.-M. Kaufman, Universitair Ziekenhuis Gent; S. Boonen, Universitair Ziekenhuis Gasthuisberg Leuven; Denmark: K. Brixen, University Hospital, Odense; B. Langdahl, Aarhus Amtssygehus; J.-E. B. Jensen, Hvidovre Hospital; Hvidovre; France: M. Audran, CHU d’Angers; C. Alexandre, Hôpital Bellevue, Saint Etienne; C. Roux, Hôpital Cochin, Paris; C.L. Benhamou, Hôpital Porte Madeleine, Orleans; C. Ribot, Hôpital Paule de Viguier, Toulouse; C. Cormier, Hôpital Cochin, Paris; J-L. Kuntz, Hôpital de Hautepierre, Strasbourg; A. Daragon, CHU de Bois Guillaume, Rouen; B. Cortet, Hôpital Roger Salengro, Lille; M. Laroche, Hôpital de Rangueil, Toulouse; M.C. de Vernejoul, Hôspital Lariboisiere, Paris; P. Fardellone, Hôpital Sud, Amiens; G. Weryha, Chu de Nancy Hôpital D’Adultes de Brabois, Vandoeuvre Les Nancy; Germany: H.W.

To determine the specificity of amplification, analysis of the pr

To determine the specificity of amplification, analysis of the product melting curve was performed after the last cycle of each amplification.

Data was captured using Stratagene MxPro Mx3005P QPCR software. Table 1 Primers employed for Real-Time PCR Target gene Sequence (5′ to 3′) Reference or GenBank accession no. E. coli 16S rDNA F GCAGGCCTAACACATGCAAGTC [30]   R TGCTGCCTCCCGTAGGAGT   traD F ACGCCTCCTGTTCTGTTTCA [DQ401103.1]   R ATCAGCCCGGTCAGATTGT   virB11 F GGATCAACTCAGCCACAAAAA [DQ401103.1] EPZ004777 mw   R CACCGTTCCGCTGTTCTATT   virD4 F GTTGTCCAGGGTAGCAGCAG [DQ401103.1]   R TGGACAACCAGGAACAAGC   dfr16 F GACCTCATCCTCCGATGG [AJ517790.2]   R TGGTCGGAGATATGGGTATAGAA   C3 F CGGACGCTGACATCTACCAA [25]   R TCCAGGTCTGCTCTCCCAAG   IL-1β F ATCAAACCCCAATCCACAGAGT [25]   R GGCACTGAAGACACCACGTT   IL-8 F TGTTTTCCTGGCATTTCTGACC [24]   R TTTACAGTGTGGGCTTGGAGGG   TNF α F ACCAGGCCTTTTCTTCAGGT [10]   R TGCCCAGTCTGTCTCCTTCT   ef1α F TGCCTTCGTCCCAATTTCAG [24]   R TACCCTCCTTGCGCTCAATC   Amplification efficiencies were measured with the formula of E = 10(-1/slope)

by two-fold dilutions of cDNA as described by Bogerd et al. [31]. Expression of the plasmid target genes was normalized to dfr16, estimated to be the most stable endogenous reference gene on the plasmid for our in vivo experiment. The function describing the relationship between C t (threshold cycle) and x (log copy number) for dfr16 ALK inhibitor was: C t = -3.45x + 13.98; R 2 = 0.99. The comparative CT method [2ΔCT method] was used to determine the expression level of analyzed genes [30]. The resultant fold units were calculated by dividing the normalized expression values with the placebo treated controls. Expression of the zebrafish inflammatory and immune response related target genes was normalized against expression of the housekeeping gene elongation MycoClean Mycoplasma Removal Kit factor 1 alpha (ef1α) [24] in challenged fish relative

to sterile physiological saline solution intubated and placebo treated controls. For absolute quantification of the total bacterial population of the gut, standard curves of 16S rDNA copy number were constructed using a PCR product of the 16S rRNA gene of Escherichia coli. The Cyclosporin A functions describing the relationship between C t (threshold cycle) and x (log copy number) for total bacteria was: C t = -3.19x + 53.66; R 2 = 0.99, as used by Castillo et al. [32]. To better address the activity of the innate immune response in zebrafish during the A. hydrophila infection, the transcription levels of the immune mediators: TNF α, IL-1β and IL-8 (pro-inflammatory cytokines) and C3 (complement system, acute phase protein) were evaluated. Fold changes in mRNA levels post-challenge and treatment were calculated in relation to the average mRNA levels of placebo treated fish. Statistical analysis The effect of treatment on selected gene expression level was analyzed with Student’s t-test as described by [33].

Our findings agree with the hypothesis that the diet-induced obes

Our findings agree with the hypothesis that the diet-induced obesity is related to changes in the relative abundance of Firmicutes and Bacteroidetes and especially an increase in proportion of the bacteria belonging to the phyla Firmicutes. We also point to HF/high-caloric diet as a contributing factor that changes the gut microbial community. To our knowledge this is the first study that has investigated the effects of diet-induced obesity on gut-microbiota in cloned pigs. More investigation is needed to optimize the cloning of experimental animals which could eventually offer a more controlled experimental model. Acknowledgements

CDK inhibitor This work was supported by a grant from the Danish Strategic Research Council (FØSU 2101-06-0034), and The Danish Research Council FTP (09–6649307). We would like to thank Sophia Rasmussen and Joanna Amenuvor for excellent technical assistance. Electronic supplementary material Additional file 1: An overview of T-RFs (bp) in cloned and non-cloned pigs and

possible bacterial taxonomy as estimated in silico through the MICA online database. (DOCX 14 KB) Additional file 2: GS-7977 molecular weight correlation between weight gain and relative abundance of Bacteroidetes Fosbretabulin clinical trial and Firmicutes. Correlation between weight-gain and relative abundance of Bacteroidetes as calculated by Spearman correlation in cloned pigs (r= −0.33, P<0.04) and non-cloned control pigs and

correlation between weight-gain and relative abundance of Firmicutes in cloned pigs (r= 0.37, P<0.02) and non-cloned control pigs (r=0.45, P<0.006). Each color represents a pig in that group i.e. pig 1 is indicated by a red dot and so on. (PDF 15 KB) References 1. Stewart JA, Chadwick VS, Murray A: Investigations into the influence of host genetics on the predominant eubacteria in the faecal microflora of children. J Carbachol Med Microbiol 2005, 54:1239–1242.PubMedCrossRef 2. Zoetendal EG, Akkermans AD, WM K-v V, de Visser JA, de Vos WM: The host genotype affects the bacterial community in the human gastronintestinal tract. Microb Ecol Health Dis 2001, 13:129–134.CrossRef 3. Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE: A core gut microbiome in obese and lean twins. Nature 2009, 457:480–484.PubMedCrossRef 4. Murphy EF, Cotter PD, Healy S, Marques TM, O’Sullivan O, Fouhy F: Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models. Gut 2010, 59:1635–1642.PubMedCrossRef 5. Pang X, Hua X, Yang Q, Ding D, Che C, Cui L: Inter-species transplantation of gut microbiota from human to pigs. ISME J 2007, 1:156–162.PubMedCrossRef 6. Guilloteau P, Zabielski R, Hammon HM, Metges CC: Nutritional programming of gastrointestinal tract development. Is the pig a good model for man? Nutr Res Rev 2010, 23:4–22.PubMedCrossRef 7.

: High-dose immunosuppressive therapy for severe systemic scleros

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